Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 BC037039-201ENSMUST00000192003 2205 ntBASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.57■□□□□ 0.72
Ccdc60Q8C4J0 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Gm10499-201ENSMUST00000174094 934 ntBASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc60Q8C4J0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Gm44771-201ENSMUST00000206975 626 ntBASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc60Q8C4J0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gm7787-201ENSMUST00000216858 688 ntBASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc60Q8C4J0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc60Q8C4J0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms