Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SprnQ8BWU1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.57□□□□□ -0.24
SprnQ8BWU1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SprnQ8BWU1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Carlr-201ENSMUST00000181515 2574 ntBASIC13.56□□□□□ -0.24
SprnQ8BWU1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Gm37722-201ENSMUST00000193757 208 ntBASIC13.56□□□□□ -0.24
SprnQ8BWU1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SprnQ8BWU1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.55□□□□□ -0.24
SprnQ8BWU1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Gm14722-201ENSMUST00000118943 689 ntBASIC13.55□□□□□ -0.24
SprnQ8BWU1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.55□□□□□ -0.24
SprnQ8BWU1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SprnQ8BWU1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Mir770-201ENSMUST00000103252 94 ntBASIC13.54□□□□□ -0.24
SprnQ8BWU1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Gm12008-201ENSMUST00000117791 755 ntBASIC13.54□□□□□ -0.24
SprnQ8BWU1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.54□□□□□ -0.24
SprnQ8BWU1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SprnQ8BWU1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms