Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne3Q8BT60 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Gm27704-201ENSMUST00000185094 107 ntBASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.86□□□□□ -0.03
Cpne3Q8BT60 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne3Q8BT60 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Gm7284-201ENSMUST00000131667 944 ntBASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Gm7367-201ENSMUST00000057611 492 ntBASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cpne3Q8BT60 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpne3Q8BT60 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Cpne3Q8BT60 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.83□□□□□ -0.03
Cpne3Q8BT60 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpne3Q8BT60 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms