Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Rprl2-201ENSMUST00000157150 290 ntBASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Gm20553-201ENSMUST00000204205 844 ntBASIC16.24■□□□□ 0.19
Rd3Q8BRE0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rd3Q8BRE0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rd3Q8BRE0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Gm16198-201ENSMUST00000118766 670 ntBASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Mir6990-201ENSMUST00000183724 91 ntBASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms