Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2bQ8BJF9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chmp2bQ8BJF9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Gm25016-201ENSMUST00000158399 131 ntBASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Chmp2bQ8BJF9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Gm23634-201ENSMUST00000175071 91 ntBASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Chmp2bQ8BJF9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Chmp2bQ8BJF9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms