Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc40Q8BI79 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc40Q8BI79 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc40Q8BI79 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Gm17807-201ENSMUST00000186869 298 ntBASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc40Q8BI79 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms