Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SynbQ8BI41 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.67□□□□□ -0.06
SynbQ8BI41 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SynbQ8BI41 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SynbQ8BI41 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SynbQ8BI41 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SynbQ8BI41 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.67□□□□□ -0.06
SynbQ8BI41 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SynbQ8BI41 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SynbQ8BI41 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SynbQ8BI41 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SynbQ8BI41 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
SynbQ8BI41 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.66□□□□□ -0.06
SynbQ8BI41 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.66□□□□□ -0.06
SynbQ8BI41 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.66□□□□□ -0.06
SynbQ8BI41 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SynbQ8BI41 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.66□□□□□ -0.06
SynbQ8BI41 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.66□□□□□ -0.06
SynbQ8BI41 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.66□□□□□ -0.06
SynbQ8BI41 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.66□□□□□ -0.06
SynbQ8BI41 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SynbQ8BI41 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SynbQ8BI41 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SynbQ8BI41 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SynbQ8BI41 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.66□□□□□ -0.06
SynbQ8BI41 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SynbQ8BI41 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SynbQ8BI41 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
SynbQ8BI41 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.65□□□□□ -0.06
SynbQ8BI41 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SynbQ8BI41 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.65□□□□□ -0.06
SynbQ8BI41 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SynbQ8BI41 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.65□□□□□ -0.06
SynbQ8BI41 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.64□□□□□ -0.07
SynbQ8BI41 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.64□□□□□ -0.07
SynbQ8BI41 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.64□□□□□ -0.07
SynbQ8BI41 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Gm18622-201ENSMUST00000219361 595 ntBASIC14.64□□□□□ -0.07
SynbQ8BI41 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SynbQ8BI41 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SynbQ8BI41 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms