Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Gm11452-201ENSMUST00000122376 690 ntBASIC18■□□□□ 0.47
Samm50Q8BGH2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18■□□□□ 0.47
Samm50Q8BGH2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18■□□□□ 0.47
Samm50Q8BGH2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18■□□□□ 0.47
Samm50Q8BGH2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Samm50Q8BGH2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Samm50Q8BGH2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Samm50Q8BGH2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Gm7506-201ENSMUST00000207758 815 ntBASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.97■□□□□ 0.47
Samm50Q8BGH2 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Samm50Q8BGH2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms