Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim6Q8BGE7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim6Q8BGE7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Gm12134-201ENSMUST00000122109 520 ntBASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Gm9987-201ENSMUST00000069768 567 ntBASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim6Q8BGE7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim6Q8BGE7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim6Q8BGE7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Gm18032-201ENSMUST00000222541 538 ntBASIC16.3■□□□□ 0.2
Trim6Q8BGE7 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim6Q8BGE7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms