Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank2Q80Z38 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank2Q80Z38 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shank2Q80Z38 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.56■□□□□ 0.72
Shank2Q80Z38 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shank2Q80Z38 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Gm9522-201ENSMUST00000182394 926 ntBASIC19.55■□□□□ 0.72
Shank2Q80Z38 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shank2Q80Z38 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Gm11918-201ENSMUST00000121660 179 ntBASIC19.54■□□□□ 0.72
Shank2Q80Z38 Mir1897-201ENSMUST00000122581 272 ntBASIC19.54■□□□□ 0.72
Shank2Q80Z38 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Shank2Q80Z38 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank2Q80Z38 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.53■□□□□ 0.72
Shank2Q80Z38 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Gm5035-201ENSMUST00000215581 927 ntBASIC19.53■□□□□ 0.72
Shank2Q80Z38 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Shank2Q80Z38 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.52■□□□□ 0.72
Shank2Q80Z38 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Shank2Q80Z38 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Shank2Q80Z38 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
Shank2Q80Z38 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Shank2Q80Z38 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank2Q80Z38 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shank2Q80Z38 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shank2Q80Z38 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Shank2Q80Z38 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Shank2Q80Z38 Gm15806-201ENSMUST00000120696 955 ntBASIC19.51■□□□□ 0.71
Shank2Q80Z38 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.51■□□□□ 0.71
Shank2Q80Z38 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms