Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.99□□□□□ -0.33
Upk3bQ80YF6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3bQ80YF6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3bQ80YF6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Gm14722-201ENSMUST00000118943 689 ntBASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Gm18032-201ENSMUST00000222541 538 ntBASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.97□□□□□ -0.33
Upk3bQ80YF6 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm10013-201ENSMUST00000106074 672 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms