Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Usp6nlQ80XC3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Gm24158-201ENSMUST00000175263 71 ntBASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Gm27430-201ENSMUST00000184585 107 ntBASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Gm44333-201ENSMUST00000197168 107 ntBASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Usp6nlQ80XC3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Gm27622-201ENSMUST00000183779 60 ntBASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Usp6nlQ80XC3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Usp6nlQ80XC3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp6nlQ80XC3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Usp6nlQ80XC3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Usp6nlQ80XC3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp6nlQ80XC3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Usp6nlQ80XC3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp6nlQ80XC3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp6nlQ80XC3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms