Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Gm27459-201ENSMUST00000184860 107 ntBASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Srrm3Q80WV7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Gm37297-201ENSMUST00000192974 2384 ntBASIC16■□□□□ 0.15
Srrm3Q80WV7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16■□□□□ 0.15
Srrm3Q80WV7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16■□□□□ 0.15
Srrm3Q80WV7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Gm7370-201ENSMUST00000219471 767 ntBASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Srrm3Q80WV7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Gm6257-201ENSMUST00000163864 910 ntBASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Srrm3Q80WV7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.97■□□□□ 0.15
Srrm3Q80WV7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms