Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TwistnbQ78WZ7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.67■□□□□ 0.1
TwistnbQ78WZ7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TwistnbQ78WZ7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TwistnbQ78WZ7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TwistnbQ78WZ7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TwistnbQ78WZ7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TwistnbQ78WZ7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TwistnbQ78WZ7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TwistnbQ78WZ7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TwistnbQ78WZ7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms