Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Snrnp40Q6PE01 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Gm16026-204ENSMUST00000162652 683 ntBASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Mir7684-201ENSMUST00000183858 60 ntBASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Gm6888-201ENSMUST00000221983 706 ntBASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Snrnp40Q6PE01 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.46□□□□□ -0.26
Snrnp40Q6PE01 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.26
Snrnp40Q6PE01 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Snrnp40Q6PE01 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Snrnp40Q6PE01 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Snrnp40Q6PE01 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Snrnp40Q6PE01 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Snrnp40Q6PE01 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms