Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Dupd1-202ENSMUST00000224735 548 ntBASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.84■□□□□ 0.77
Chd4Q6PDQ2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd4Q6PDQ2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.83■□□□□ 0.77
Chd4Q6PDQ2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd4Q6PDQ2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chd4Q6PDQ2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chd4Q6PDQ2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Chd4Q6PDQ2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.83■□□□□ 0.77
Chd4Q6PDQ2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd4Q6PDQ2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd4Q6PDQ2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd4Q6PDQ2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd4Q6PDQ2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Chd4Q6PDQ2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Chd4Q6PDQ2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chd4Q6PDQ2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Gm24543-201ENSMUST00000103867 82 ntBASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Gm18766-201ENSMUST00000189811 808 ntBASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.82■□□□□ 0.76
Chd4Q6PDQ2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd4Q6PDQ2 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.8■□□□□ 0.76
Chd4Q6PDQ2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Gm6888-201ENSMUST00000221983 706 ntBASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Chd4Q6PDQ2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms