Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Krt39Q6IFX4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Mir3081-201ENSMUST00000175305 84 ntBASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Krt39Q6IFX4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Gm27742-201ENSMUST00000184667 60 ntBASIC16.97■□□□□ 0.31
Krt39Q6IFX4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.97■□□□□ 0.31
Krt39Q6IFX4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Krt39Q6IFX4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt39Q6IFX4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Krt39Q6IFX4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Krt39Q6IFX4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.3
Krt39Q6IFX4 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.96■□□□□ 0.3
Krt39Q6IFX4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Krt39Q6IFX4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Krt39Q6IFX4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Krt39Q6IFX4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt39Q6IFX4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms