Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Six2Q62232 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Six2Q62232 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Six2Q62232 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Six2Q62232 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six2Q62232 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Six2Q62232 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Six2Q62232 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Six2Q62232 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six2Q62232 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Six2Q62232 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Six2Q62232 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.33■□□□□ 0.2
Six2Q62232 Gm6376-201ENSMUST00000209407 580 ntBASIC16.33■□□□□ 0.2
Six2Q62232 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.33■□□□□ 0.2
Six2Q62232 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Rps4l-201ENSMUST00000071745 943 ntBASIC16.33■□□□□ 0.2
Six2Q62232 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.33■□□□□ 0.2
Six2Q62232 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.33■□□□□ 0.2
Six2Q62232 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.33■□□□□ 0.2
Six2Q62232 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.33■□□□□ 0.2
Six2Q62232 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six2Q62232 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Six2Q62232 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Six2Q62232 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.32■□□□□ 0.2
Six2Q62232 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.32■□□□□ 0.2
Six2Q62232 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.32■□□□□ 0.2
Six2Q62232 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.32■□□□□ 0.2
Six2Q62232 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Six2Q62232 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.32■□□□□ 0.2
Six2Q62232 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six2Q62232 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.31■□□□□ 0.2
Six2Q62232 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Six2Q62232 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Six2Q62232 Gm18489-201ENSMUST00000172565 551 ntBASIC16.31■□□□□ 0.2
Six2Q62232 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Six2Q62232 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.31■□□□□ 0.2
Six2Q62232 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.31■□□□□ 0.2
Six2Q62232 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
Six2Q62232 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six2Q62232 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms