Protein–RNA interactions for Protein: Q62187

Ttf1, Transcription termination factor 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttf1Q62187 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.43□□□□□ -0.1
Ttf1Q62187 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Ttf1Q62187 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.43□□□□□ -0.1
Ttf1Q62187 Gm27646-201ENSMUST00000183989 110 ntBASIC14.43□□□□□ -0.1
Ttf1Q62187 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.43□□□□□ -0.1
Ttf1Q62187 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.43□□□□□ -0.1
Ttf1Q62187 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ttf1Q62187 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ttf1Q62187 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.43□□□□□ -0.1
Ttf1Q62187 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.43□□□□□ -0.1
Ttf1Q62187 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttf1Q62187 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.42□□□□□ -0.1
Ttf1Q62187 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.42□□□□□ -0.1
Ttf1Q62187 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.42□□□□□ -0.1
Ttf1Q62187 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttf1Q62187 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.41□□□□□ -0.1
Ttf1Q62187 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ttf1Q62187 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ttf1Q62187 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttf1Q62187 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.4□□□□□ -0.1
Ttf1Q62187 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.4□□□□□ -0.1
Ttf1Q62187 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttf1Q62187 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms