Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.86□□□□□ -0.35
SspnQ62147 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.86□□□□□ -0.35
SspnQ62147 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SspnQ62147 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.86□□□□□ -0.35
SspnQ62147 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Gm27704-201ENSMUST00000185094 107 ntBASIC12.86□□□□□ -0.35
SspnQ62147 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Gm44454-201ENSMUST00000198541 138 ntBASIC12.86□□□□□ -0.35
SspnQ62147 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SspnQ62147 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SspnQ62147 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.86□□□□□ -0.35
SspnQ62147 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SspnQ62147 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SspnQ62147 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SspnQ62147 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
SspnQ62147 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SspnQ62147 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SspnQ62147 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.85□□□□□ -0.35
SspnQ62147 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.85□□□□□ -0.35
SspnQ62147 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SspnQ62147 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.85□□□□□ -0.35
SspnQ62147 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SspnQ62147 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.84□□□□□ -0.35
SspnQ62147 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SspnQ62147 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SspnQ62147 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
SspnQ62147 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.84□□□□□ -0.35
SspnQ62147 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Gm14859-201ENSMUST00000117752 357 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.84□□□□□ -0.35
SspnQ62147 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.84□□□□□ -0.35
SspnQ62147 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SspnQ62147 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm8825-201ENSMUST00000182565 998 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm4518-201ENSMUST00000182638 718 ntBASIC12.84□□□□□ -0.35
SspnQ62147 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms