Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gli3Q61602 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gli3Q61602 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gli3Q61602 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gli3Q61602 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC20.46■□□□□ 0.87
Gli3Q61602 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gli3Q61602 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gli3Q61602 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gli3Q61602 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Gli3Q61602 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gli3Q61602 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Gli3Q61602 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gli3Q61602 Gm15593-201ENSMUST00000122085 1008 ntBASIC20.46■□□□□ 0.87
Gli3Q61602 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC20.46■□□□□ 0.87
Gli3Q61602 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gli3Q61602 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC20.46■□□□□ 0.87
Gli3Q61602 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Gli3Q61602 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.45■□□□□ 0.86
Gli3Q61602 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gli3Q61602 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gli3Q61602 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gli3Q61602 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC20.45■□□□□ 0.86
Gli3Q61602 Gm27243-201ENSMUST00000183964 521 ntBASIC20.45■□□□□ 0.86
Gli3Q61602 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC20.45■□□□□ 0.86
Gli3Q61602 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
Gli3Q61602 Gm18056-201ENSMUST00000207670 568 ntBASIC20.45■□□□□ 0.86
Gli3Q61602 Gm18061-201ENSMUST00000208350 562 ntBASIC20.45■□□□□ 0.86
Gli3Q61602 Gm18063-201ENSMUST00000208529 568 ntBASIC20.45■□□□□ 0.86
Gli3Q61602 Gm18052-201ENSMUST00000208750 559 ntBASIC20.45■□□□□ 0.86
Gli3Q61602 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC20.45■□□□□ 0.86
Gli3Q61602 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.45■□□□□ 0.86
Gli3Q61602 AC139580.1-202ENSMUST00000223574 928 ntBASIC20.45■□□□□ 0.86
Gli3Q61602 AC110817.1-201ENSMUST00000225706 605 ntBASIC20.45■□□□□ 0.86
Gli3Q61602 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Gli3Q61602 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Gli3Q61602 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gli3Q61602 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Gli3Q61602 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gli3Q61602 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Gli3Q61602 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.44■□□□□ 0.86
Gli3Q61602 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC20.44■□□□□ 0.86
Gli3Q61602 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC20.44■□□□□ 0.86
Gli3Q61602 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC20.44■□□□□ 0.86
Gli3Q61602 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gli3Q61602 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC20.44■□□□□ 0.86
Gli3Q61602 AC122459.1-201ENSMUST00000228373 885 ntBASIC20.44■□□□□ 0.86
Gli3Q61602 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gli3Q61602 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Gli3Q61602 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gli3Q61602 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 AC154527.2-201ENSMUST00000225256 1466 ntBASIC20.43■□□□□ 0.86
Gli3Q61602 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
Gli3Q61602 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Gli3Q61602 Gm27731-201ENSMUST00000185192 107 ntBASIC20.43■□□□□ 0.86
Gli3Q61602 Gm2495-201ENSMUST00000191160 466 ntBASIC20.43■□□□□ 0.86
Gli3Q61602 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC20.43■□□□□ 0.86
Gli3Q61602 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC20.43■□□□□ 0.86
Gli3Q61602 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.43■□□□□ 0.86
Gli3Q61602 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Gli3Q61602 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Gli3Q61602 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gli3Q61602 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.42■□□□□ 0.86
Gli3Q61602 Gm5940-201ENSMUST00000117582 1068 ntBASIC20.42■□□□□ 0.86
Gli3Q61602 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC20.42■□□□□ 0.86
Gli3Q61602 Gm8463-201ENSMUST00000208573 613 ntBASIC20.42■□□□□ 0.86
Gli3Q61602 Gm7399-201ENSMUST00000032395 858 ntBASIC20.42■□□□□ 0.86
Gli3Q61602 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Gli3Q61602 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC20.42■□□□□ 0.86
Gli3Q61602 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC20.42■□□□□ 0.86
Gli3Q61602 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.42■□□□□ 0.86
Gli3Q61602 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.42■□□□□ 0.86
Gli3Q61602 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gli3Q61602 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gli3Q61602 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms