Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.17□□□□□ -0.14
Clcn4Q61418 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn4Q61418 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn4Q61418 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clcn4Q61418 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clcn4Q61418 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.16□□□□□ -0.14
Clcn4Q61418 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clcn4Q61418 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clcn4Q61418 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.16□□□□□ -0.14
Clcn4Q61418 Gm27459-201ENSMUST00000184860 107 ntBASIC14.16□□□□□ -0.14
Clcn4Q61418 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.16□□□□□ -0.14
Clcn4Q61418 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clcn4Q61418 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Clcn4Q61418 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clcn4Q61418 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn4Q61418 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.15□□□□□ -0.14
Clcn4Q61418 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.15□□□□□ -0.14
Clcn4Q61418 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.15□□□□□ -0.14
Clcn4Q61418 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.15□□□□□ -0.14
Clcn4Q61418 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.15□□□□□ -0.14
Clcn4Q61418 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn4Q61418 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.15□□□□□ -0.14
Clcn4Q61418 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Clcn4Q61418 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clcn4Q61418 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Clcn4Q61418 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Clcn4Q61418 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.14□□□□□ -0.15
Clcn4Q61418 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Clcn4Q61418 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clcn4Q61418 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Gm15372-201ENSMUST00000120729 834 ntBASIC14.14□□□□□ -0.15
Clcn4Q61418 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.14□□□□□ -0.15
Clcn4Q61418 Gm5864-201ENSMUST00000202263 970 ntBASIC14.14□□□□□ -0.15
Clcn4Q61418 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.14□□□□□ -0.15
Clcn4Q61418 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.14□□□□□ -0.15
Clcn4Q61418 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clcn4Q61418 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn4Q61418 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Clcn4Q61418 BC037039-201ENSMUST00000192003 2205 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms