Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.78□□□□□ -0.36
Hcfc1Q61191 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Gm9794-201ENSMUST00000202370 423 ntBASIC12.78□□□□□ -0.36
Hcfc1Q61191 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.78□□□□□ -0.36
Hcfc1Q61191 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Hcfc1Q61191 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Gm18766-201ENSMUST00000189811 808 ntBASIC12.78□□□□□ -0.36
Hcfc1Q61191 Gm42612-201ENSMUST00000197986 623 ntBASIC12.78□□□□□ -0.36
Hcfc1Q61191 Gm43170-201ENSMUST00000199827 612 ntBASIC12.78□□□□□ -0.36
Hcfc1Q61191 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Gm6218-201ENSMUST00000219812 628 ntBASIC12.78□□□□□ -0.36
Hcfc1Q61191 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcfc1Q61191 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.77□□□□□ -0.36
Hcfc1Q61191 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcfc1Q61191 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Gm6912-201ENSMUST00000117218 544 ntBASIC12.77□□□□□ -0.37
Hcfc1Q61191 Gm29667-201ENSMUST00000190817 490 ntBASIC12.77□□□□□ -0.37
Hcfc1Q61191 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.77□□□□□ -0.37
Hcfc1Q61191 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.77□□□□□ -0.37
Hcfc1Q61191 Dupd1-202ENSMUST00000224735 548 ntBASIC12.77□□□□□ -0.37
Hcfc1Q61191 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcfc1Q61191 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Gm5566-201ENSMUST00000116118 459 ntBASIC12.76□□□□□ -0.37
Hcfc1Q61191 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.76□□□□□ -0.37
Hcfc1Q61191 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.76□□□□□ -0.37
Hcfc1Q61191 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Asic1-205ENSMUST00000228185 1818 ntBASIC12.76□□□□□ -0.37
Hcfc1Q61191 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.76□□□□□ -0.37
Hcfc1Q61191 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcfc1Q61191 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms