Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ptch1Q61115 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Gm27631-201ENSMUST00000184163 466 ntBASIC21.86■■□□□ 1.09
Ptch1Q61115 Gm28760-201ENSMUST00000185995 736 ntBASIC21.86■■□□□ 1.09
Ptch1Q61115 AC149588.3-201ENSMUST00000227515 150 ntBASIC21.86■■□□□ 1.09
Ptch1Q61115 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ptch1Q61115 Gm9797-201ENSMUST00000052902 613 ntBASIC21.86■■□□□ 1.09
Ptch1Q61115 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.86■■□□□ 1.09
Ptch1Q61115 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptch1Q61115 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ptch1Q61115 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ptch1Q61115 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ptch1Q61115 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Ptch1Q61115 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptch1Q61115 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ptch1Q61115 Gm15678-201ENSMUST00000117573 960 ntBASIC21.85■■□□□ 1.09
Ptch1Q61115 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ptch1Q61115 Gm31326-201ENSMUST00000191856 1048 ntBASIC21.85■■□□□ 1.09
Ptch1Q61115 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptch1Q61115 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptch1Q61115 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptch1Q61115 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptch1Q61115 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptch1Q61115 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ptch1Q61115 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptch1Q61115 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.84■■□□□ 1.09
Ptch1Q61115 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC21.84■■□□□ 1.09
Ptch1Q61115 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Ptch1Q61115 Gm15806-201ENSMUST00000120696 955 ntBASIC21.84■■□□□ 1.09
Ptch1Q61115 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC21.84■■□□□ 1.09
Ptch1Q61115 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Ptch1Q61115 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC21.84■■□□□ 1.09
Ptch1Q61115 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC21.84■■□□□ 1.09
Ptch1Q61115 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptch1Q61115 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptch1Q61115 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Ptch1Q61115 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptch1Q61115 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptch1Q61115 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC21.83■■□□□ 1.09
Ptch1Q61115 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC21.83■■□□□ 1.09
Ptch1Q61115 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Ptch1Q61115 AC166349.1-201ENSMUST00000220866 695 ntBASIC21.83■■□□□ 1.09
Ptch1Q61115 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptch1Q61115 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptch1Q61115 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ptch1Q61115 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.83■■□□□ 1.08
Ptch1Q61115 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ptch1Q61115 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ptch1Q61115 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC21.82■■□□□ 1.08
Ptch1Q61115 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC21.82■■□□□ 1.08
Ptch1Q61115 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ptch1Q61115 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ptch1Q61115 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC21.82■■□□□ 1.08
Ptch1Q61115 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 AC131068.2-201ENSMUST00000226175 1453 ntBASIC21.82■■□□□ 1.08
Ptch1Q61115 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptch1Q61115 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Ptch1Q61115 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ptch1Q61115 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ptch1Q61115 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC21.81■■□□□ 1.08
Ptch1Q61115 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC21.81■■□□□ 1.08
Ptch1Q61115 AC238811.3-201ENSMUST00000225422 709 ntBASIC21.81■■□□□ 1.08
Ptch1Q61115 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ptch1Q61115 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.81■■□□□ 1.08
Ptch1Q61115 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms