Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scarb1Q61009 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scarb1Q61009 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.97□□□□□ -0.33
Scarb1Q61009 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.97□□□□□ -0.33
Scarb1Q61009 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.97□□□□□ -0.33
Scarb1Q61009 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.97□□□□□ -0.33
Scarb1Q61009 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scarb1Q61009 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Scarb1Q61009 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.97□□□□□ -0.33
Scarb1Q61009 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scarb1Q61009 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scarb1Q61009 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scarb1Q61009 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Scarb1Q61009 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.96□□□□□ -0.33
Scarb1Q61009 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.96□□□□□ -0.33
Scarb1Q61009 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scarb1Q61009 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scarb1Q61009 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scarb1Q61009 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.96□□□□□ -0.34
Scarb1Q61009 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scarb1Q61009 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scarb1Q61009 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Scarb1Q61009 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Scarb1Q61009 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scarb1Q61009 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Scarb1Q61009 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scarb1Q61009 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.95□□□□□ -0.34
Scarb1Q61009 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Gm29257-201ENSMUST00000186115 639 ntBASIC12.95□□□□□ -0.34
Scarb1Q61009 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scarb1Q61009 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scarb1Q61009 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms