Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Gm10499-201ENSMUST00000174094 934 ntBASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Mir8117-201ENSMUST00000184773 107 ntBASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Gm2213-201ENSMUST00000197485 688 ntBASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6d-4Q5R1I0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Mir3113-201ENSMUST00000175478 76 ntBASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Gm37935-201ENSMUST00000192012 982 ntBASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Gm18246-201ENSMUST00000221023 728 ntBASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.87□□□□□ -0.35
Trav6d-4Q5R1I0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-4Q5R1I0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms