Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav7d-4Q5R1H9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Trav7d-4Q5R1H9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7d-4Q5R1H9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7d-4Q5R1H9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms