Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Syt7-204ENSMUST00000223586 1344 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Gm13216-201ENSMUST00000117145 591 ntBASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Gm27680-201ENSMUST00000184192 160 ntBASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Gm28631-201ENSMUST00000190740 334 ntBASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Gm44344-201ENSMUST00000200287 129 ntBASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav8d-2Q5R1B6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Gm18766-201ENSMUST00000189811 808 ntBASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-2Q5R1B6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Gm18187-201ENSMUST00000196476 984 ntBASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-2Q5R1B6 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Gm12490-201ENSMUST00000120255 560 ntBASIC14.85□□□□□ -0.03
Trav8d-2Q5R1B6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms