Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Urb1Q571H0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Urb1Q571H0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Urb1Q571H0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Urb1Q571H0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Urb1Q571H0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Urb1Q571H0 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.13□□□□□ -0.15
Urb1Q571H0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Urb1Q571H0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Urb1Q571H0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.12□□□□□ -0.15
Urb1Q571H0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Urb1Q571H0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Urb1Q571H0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.12□□□□□ -0.15
Urb1Q571H0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.12□□□□□ -0.15
Urb1Q571H0 Gm27306-201ENSMUST00000183970 107 ntBASIC14.12□□□□□ -0.15
Urb1Q571H0 Gm19164-201ENSMUST00000210667 640 ntBASIC14.12□□□□□ -0.15
Urb1Q571H0 Gm7730-201ENSMUST00000212486 454 ntBASIC14.12□□□□□ -0.15
Urb1Q571H0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Urb1Q571H0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.12□□□□□ -0.15
Urb1Q571H0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Urb1Q571H0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.11□□□□□ -0.15
Urb1Q571H0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Urb1Q571H0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.11□□□□□ -0.15
Urb1Q571H0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Urb1Q571H0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Urb1Q571H0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Urb1Q571H0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.11□□□□□ -0.15
Urb1Q571H0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.11□□□□□ -0.15
Urb1Q571H0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Urb1Q571H0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Urb1Q571H0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.1□□□□□ -0.15
Urb1Q571H0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.1□□□□□ -0.15
Urb1Q571H0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.1□□□□□ -0.15
Urb1Q571H0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Urb1Q571H0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Urb1Q571H0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Urb1Q571H0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Urb1Q571H0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Urb1Q571H0 Gm13823-201ENSMUST00000119930 345 ntBASIC14.1□□□□□ -0.15
Urb1Q571H0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Urb1Q571H0 Gm27430-201ENSMUST00000184585 107 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms