Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rc3h1Q4VGL6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rc3h1Q4VGL6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Rpph1-201ENSMUST00000175096 319 ntBASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rc3h1Q4VGL6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Gm13365-201ENSMUST00000121188 973 ntBASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Gm45612-201ENSMUST00000211320 160 ntBASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms