Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Gm7367-201ENSMUST00000057611 492 ntBASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa3Q3UPR0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa3Q3UPR0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Gm11950-201ENSMUST00000121615 838 ntBASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa3Q3UPR0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Gm6257-201ENSMUST00000163864 910 ntBASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.26□□□□□ -0.29
Shisa3Q3UPR0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms