Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col5a2Q3U962 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col5a2Q3U962 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col5a2Q3U962 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Col5a2Q3U962 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col5a2Q3U962 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col5a2Q3U962 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col5a2Q3U962 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
Col5a2Q3U962 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Gm11478-201ENSMUST00000117851 599 ntBASIC18.01■□□□□ 0.47
Col5a2Q3U962 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Gm42612-201ENSMUST00000197986 623 ntBASIC18.01■□□□□ 0.47
Col5a2Q3U962 Gm43170-201ENSMUST00000199827 612 ntBASIC18.01■□□□□ 0.47
Col5a2Q3U962 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.01■□□□□ 0.47
Col5a2Q3U962 Gm13829-201ENSMUST00000119600 138 ntBASIC18.01■□□□□ 0.47
Col5a2Q3U962 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col5a2Q3U962 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18■□□□□ 0.47
Col5a2Q3U962 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18■□□□□ 0.47
Col5a2Q3U962 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18■□□□□ 0.47
Col5a2Q3U962 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18■□□□□ 0.47
Col5a2Q3U962 Gm15653-201ENSMUST00000119247 907 ntBASIC18■□□□□ 0.47
Col5a2Q3U962 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Col5a2Q3U962 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18■□□□□ 0.47
Col5a2Q3U962 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col5a2Q3U962 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col5a2Q3U962 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.99■□□□□ 0.47
Col5a2Q3U962 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col5a2Q3U962 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.99■□□□□ 0.47
Col5a2Q3U962 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.99■□□□□ 0.47
Col5a2Q3U962 Gm9908-201ENSMUST00000211534 448 ntBASIC17.99■□□□□ 0.47
Col5a2Q3U962 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms