Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Gm29518-201ENSMUST00000190858 372 ntBASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim43aQ3TL54 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Gm12134-201ENSMUST00000122109 520 ntBASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Gm25406-201ENSMUST00000157599 105 ntBASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43aQ3TL54 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Gm27704-201ENSMUST00000185094 107 ntBASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.27■□□□□ 0.2
Trim43aQ3TL54 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43aQ3TL54 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43aQ3TL54 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim43aQ3TL54 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim43aQ3TL54 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trim43aQ3TL54 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43aQ3TL54 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43aQ3TL54 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms