Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Thumpd3P97770 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Thumpd3P97770 Gm12895-201ENSMUST00000122214 226 ntBASIC15.65■□□□□ 0.1
Thumpd3P97770 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.65■□□□□ 0.1
Thumpd3P97770 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.65■□□□□ 0.1
Thumpd3P97770 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Thumpd3P97770 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.65■□□□□ 0.1
Thumpd3P97770 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.65■□□□□ 0.1
Thumpd3P97770 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Thumpd3P97770 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.65■□□□□ 0.1
Thumpd3P97770 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd3P97770 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.65■□□□□ 0.1
Thumpd3P97770 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Thumpd3P97770 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.64■□□□□ 0.09
Thumpd3P97770 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Thumpd3P97770 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.64■□□□□ 0.09
Thumpd3P97770 Gm44430-201ENSMUST00000203376 995 ntBASIC15.64■□□□□ 0.09
Thumpd3P97770 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Birc2-201ENSMUST00000054878 378 ntBASIC15.64■□□□□ 0.09
Thumpd3P97770 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd3P97770 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Thumpd3P97770 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Thumpd3P97770 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.63■□□□□ 0.09
Thumpd3P97770 Mzt1-203ENSMUST00000227948 952 ntBASIC15.63■□□□□ 0.09
Thumpd3P97770 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.63■□□□□ 0.09
Thumpd3P97770 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.63■□□□□ 0.09
Thumpd3P97770 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.63■□□□□ 0.09
Thumpd3P97770 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.63■□□□□ 0.09
Thumpd3P97770 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd3P97770 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Thumpd3P97770 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Thumpd3P97770 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Thumpd3P97770 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.62■□□□□ 0.09
Thumpd3P97770 Gm28659-201ENSMUST00000188013 759 ntBASIC15.62■□□□□ 0.09
Thumpd3P97770 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.62■□□□□ 0.09
Thumpd3P97770 Gm43347-201ENSMUST00000200226 580 ntBASIC15.62■□□□□ 0.09
Thumpd3P97770 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.62■□□□□ 0.09
Thumpd3P97770 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.62■□□□□ 0.09
Thumpd3P97770 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Thumpd3P97770 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Thumpd3P97770 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd3P97770 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms