Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc1P97496 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc1P97496 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.14■□□□□ 0.65
Smarcc1P97496 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Smarcc1P97496 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc1P97496 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Smarcc1P97496 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Smarcc1P97496 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc1P97496 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc1P97496 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcc1P97496 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc1P97496 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcc1P97496 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc1P97496 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Smarcc1P97496 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc1P97496 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcc1P97496 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Smarcc1P97496 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcc1P97496 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.13■□□□□ 0.65
Smarcc1P97496 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smarcc1P97496 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smarcc1P97496 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcc1P97496 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smarcc1P97496 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.12■□□□□ 0.65
Smarcc1P97496 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.12■□□□□ 0.65
Smarcc1P97496 Gm15483-201ENSMUST00000120338 456 ntBASIC19.12■□□□□ 0.65
Smarcc1P97496 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Gm43767-201ENSMUST00000198933 381 ntBASIC19.12■□□□□ 0.65
Smarcc1P97496 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.12■□□□□ 0.65
Smarcc1P97496 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Smarcc1P97496 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smarcc1P97496 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Smarcc1P97496 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcc1P97496 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.11■□□□□ 0.65
Smarcc1P97496 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.11■□□□□ 0.65
Smarcc1P97496 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Smarcc1P97496 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.11■□□□□ 0.65
Smarcc1P97496 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smarcc1P97496 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcc1P97496 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
Smarcc1P97496 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Smarcc1P97496 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Smarcc1P97496 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.1■□□□□ 0.65
Smarcc1P97496 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smarcc1P97496 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smarcc1P97496 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcc1P97496 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.1■□□□□ 0.65
Smarcc1P97496 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.09■□□□□ 0.65
Smarcc1P97496 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.09■□□□□ 0.65
Smarcc1P97496 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.09■□□□□ 0.65
Smarcc1P97496 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Smarcc1P97496 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Gm29541-201ENSMUST00000191351 678 ntBASIC19.09■□□□□ 0.65
Smarcc1P97496 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcc1P97496 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms