Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.15□□□□□ -0.14
Cacna1aP97445 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1aP97445 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1aP97445 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1aP97445 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1aP97445 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1aP97445 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.14□□□□□ -0.15
Cacna1aP97445 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cacna1aP97445 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1aP97445 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.14□□□□□ -0.15
Cacna1aP97445 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.14□□□□□ -0.15
Cacna1aP97445 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.14□□□□□ -0.15
Cacna1aP97445 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cacna1aP97445 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1aP97445 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.14□□□□□ -0.15
Cacna1aP97445 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1aP97445 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1aP97445 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.13□□□□□ -0.15
Cacna1aP97445 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1aP97445 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cacna1aP97445 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Gm12151-201ENSMUST00000121374 290 ntBASIC14.12□□□□□ -0.15
Cacna1aP97445 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cacna1aP97445 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.12□□□□□ -0.15
Cacna1aP97445 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Gm8318-201ENSMUST00000182954 872 ntBASIC14.12□□□□□ -0.15
Cacna1aP97445 Gm10253-201ENSMUST00000194270 940 ntBASIC14.12□□□□□ -0.15
Cacna1aP97445 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cacna1aP97445 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1aP97445 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms