Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.2■□□□□ 0.66
Nkx2-3P97334 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-3P97334 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.19■□□□□ 0.66
Nkx2-3P97334 Gm28630-201ENSMUST00000187806 498 ntBASIC19.19■□□□□ 0.66
Nkx2-3P97334 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.19■□□□□ 0.66
Nkx2-3P97334 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.19■□□□□ 0.66
Nkx2-3P97334 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.19■□□□□ 0.66
Nkx2-3P97334 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.19■□□□□ 0.66
Nkx2-3P97334 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nkx2-3P97334 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.18■□□□□ 0.66
Nkx2-3P97334 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.18■□□□□ 0.66
Nkx2-3P97334 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nkx2-3P97334 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.18■□□□□ 0.66
Nkx2-3P97334 Gm38225-201ENSMUST00000194001 393 ntBASIC19.18■□□□□ 0.66
Nkx2-3P97334 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.18■□□□□ 0.66
Nkx2-3P97334 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-3P97334 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.17■□□□□ 0.66
Nkx2-3P97334 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.17■□□□□ 0.66
Nkx2-3P97334 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.17■□□□□ 0.66
Nkx2-3P97334 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-3P97334 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-3P97334 Gm27989-201ENSMUST00000184721 107 ntBASIC19.16■□□□□ 0.66
Nkx2-3P97334 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms