Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
SgcaP82350 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.89□□□□□ -0.35
SgcaP82350 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.89□□□□□ -0.35
SgcaP82350 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.89□□□□□ -0.35
SgcaP82350 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SgcaP82350 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
SgcaP82350 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SgcaP82350 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SgcaP82350 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SgcaP82350 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.88□□□□□ -0.35
SgcaP82350 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SgcaP82350 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.88□□□□□ -0.35
SgcaP82350 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.88□□□□□ -0.35
SgcaP82350 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Odf3b-204ENSMUST00000227834 930 ntBASIC12.88□□□□□ -0.35
SgcaP82350 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SgcaP82350 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SgcaP82350 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.88□□□□□ -0.35
SgcaP82350 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SgcaP82350 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.88□□□□□ -0.35
SgcaP82350 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SgcaP82350 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.88□□□□□ -0.35
SgcaP82350 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
SgcaP82350 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SgcaP82350 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.87□□□□□ -0.35
SgcaP82350 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.87□□□□□ -0.35
SgcaP82350 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SgcaP82350 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SgcaP82350 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SgcaP82350 Gm8520-201ENSMUST00000186517 868 ntBASIC12.87□□□□□ -0.35
SgcaP82350 Gm3375-201ENSMUST00000203929 796 ntBASIC12.87□□□□□ -0.35
SgcaP82350 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SgcaP82350 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
SgcaP82350 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms