Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.58■□□□□ 0.24
Irf3P70671 Gm13365-201ENSMUST00000121188 973 ntBASIC16.58■□□□□ 0.24
Irf3P70671 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Irf3P70671 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.58■□□□□ 0.24
Irf3P70671 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.58■□□□□ 0.24
Irf3P70671 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Irf3P70671 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Irf3P70671 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
Irf3P70671 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Irf3P70671 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Irf3P70671 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Irf3P70671 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Irf3P70671 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Irf3P70671 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.57■□□□□ 0.24
Irf3P70671 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.57■□□□□ 0.24
Irf3P70671 Celf4-206ENSMUST00000224553 1729 ntBASIC16.57■□□□□ 0.24
Irf3P70671 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.57■□□□□ 0.24
Irf3P70671 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Irf3P70671 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
Irf3P70671 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.57■□□□□ 0.24
Irf3P70671 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf3P70671 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.57■□□□□ 0.24
Irf3P70671 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf3P70671 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.57■□□□□ 0.24
Irf3P70671 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.57■□□□□ 0.24
Irf3P70671 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Irf3P70671 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf3P70671 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Irf3P70671 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.57■□□□□ 0.24
Irf3P70671 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Irf3P70671 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Irf3P70671 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.56■□□□□ 0.24
Irf3P70671 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Irf3P70671 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.56■□□□□ 0.24
Irf3P70671 Gm43767-201ENSMUST00000198933 381 ntBASIC16.56■□□□□ 0.24
Irf3P70671 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Irf3P70671 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.56■□□□□ 0.24
Irf3P70671 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.56■□□□□ 0.24
Irf3P70671 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.56■□□□□ 0.24
Irf3P70671 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Irf3P70671 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Irf3P70671 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Irf3P70671 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Gm18889-201ENSMUST00000174284 929 ntBASIC16.55■□□□□ 0.24
Irf3P70671 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.55■□□□□ 0.24
Irf3P70671 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.55■□□□□ 0.24
Irf3P70671 Gm18057-201ENSMUST00000208220 503 ntBASIC16.55■□□□□ 0.24
Irf3P70671 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.55■□□□□ 0.24
Irf3P70671 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Irf3P70671 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Irf3P70671 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Irf3P70671 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Irf3P70671 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms