Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.5□□□□□ -0.09
Nup43P59235 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nup43P59235 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nup43P59235 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.5□□□□□ -0.09
Nup43P59235 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.49□□□□□ -0.09
Nup43P59235 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup43P59235 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nup43P59235 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Nup43P59235 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nup43P59235 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nup43P59235 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.49□□□□□ -0.09
Nup43P59235 Gm12350-201ENSMUST00000121208 462 ntBASIC14.49□□□□□ -0.09
Nup43P59235 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Gm9682-201ENSMUST00000197505 556 ntBASIC14.49□□□□□ -0.09
Nup43P59235 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nup43P59235 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nup43P59235 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nup43P59235 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.49□□□□□ -0.09
Nup43P59235 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup43P59235 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Nup43P59235 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.48□□□□□ -0.09
Nup43P59235 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Nup43P59235 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.48□□□□□ -0.09
Nup43P59235 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.48□□□□□ -0.09
Nup43P59235 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Gm7787-201ENSMUST00000216858 688 ntBASIC14.48□□□□□ -0.09
Nup43P59235 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.48□□□□□ -0.09
Nup43P59235 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Nup43P59235 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Nup43P59235 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.48□□□□□ -0.09
Nup43P59235 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.48□□□□□ -0.09
Nup43P59235 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Nup43P59235 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup43P59235 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nup43P59235 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Nup43P59235 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.47□□□□□ -0.09
Nup43P59235 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.47□□□□□ -0.09
Nup43P59235 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.47□□□□□ -0.09
Nup43P59235 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.47□□□□□ -0.09
Nup43P59235 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.47□□□□□ -0.09
Nup43P59235 Gm45167-201ENSMUST00000208007 322 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms