Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tpm2P58774 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.67■□□□□ 0.42
Tpm2P58774 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Tpm2P58774 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.67■□□□□ 0.42
Tpm2P58774 Gm27389-201ENSMUST00000183622 195 ntBASIC17.67■□□□□ 0.42
Tpm2P58774 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.67■□□□□ 0.42
Tpm2P58774 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC17.67■□□□□ 0.42
Tpm2P58774 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tpm2P58774 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpm2P58774 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tpm2P58774 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tpm2P58774 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.66■□□□□ 0.42
Tpm2P58774 Gm13559-201ENSMUST00000120476 863 ntBASIC17.66■□□□□ 0.42
Tpm2P58774 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tpm2P58774 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.66■□□□□ 0.42
Tpm2P58774 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tpm2P58774 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.65■□□□□ 0.42
Tpm2P58774 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.65■□□□□ 0.42
Tpm2P58774 Gm45058-201ENSMUST00000205810 766 ntBASIC17.65■□□□□ 0.42
Tpm2P58774 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.65■□□□□ 0.42
Tpm2P58774 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Tpm2P58774 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Tpm2P58774 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tpm2P58774 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.65■□□□□ 0.42
Tpm2P58774 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.65■□□□□ 0.42
Tpm2P58774 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tpm2P58774 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm2P58774 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tpm2P58774 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Tpm2P58774 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.64■□□□□ 0.41
Tpm2P58774 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.64■□□□□ 0.41
Tpm2P58774 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.64■□□□□ 0.41
Tpm2P58774 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tpm2P58774 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm2P58774 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms