Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-1P50220 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.75□□□□□ -0.37
Nkx2-1P50220 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Mir5130-201ENSMUST00000175160 84 ntBASIC12.75□□□□□ -0.37
Nkx2-1P50220 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Mir6982-201ENSMUST00000184354 68 ntBASIC12.75□□□□□ -0.37
Nkx2-1P50220 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Gm7213-201ENSMUST00000215977 950 ntBASIC12.75□□□□□ -0.37
Nkx2-1P50220 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-1P50220 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Mir1668-201ENSMUST00000184114 107 ntBASIC12.74□□□□□ -0.37
Nkx2-1P50220 Gm43799-201ENSMUST00000201845 579 ntBASIC12.74□□□□□ -0.37
Nkx2-1P50220 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.74□□□□□ -0.37
Nkx2-1P50220 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-1P50220 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.73□□□□□ -0.37
Nkx2-1P50220 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.73□□□□□ -0.37
Nkx2-1P50220 Gm7889-201ENSMUST00000185591 958 ntBASIC12.73□□□□□ -0.37
Nkx2-1P50220 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms