Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox18P43680 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Sox18P43680 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Sox18P43680 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sox18P43680 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Sox18P43680 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.69□□□□□ -0.06
Sox18P43680 Gm18187-201ENSMUST00000196476 984 ntBASIC14.69□□□□□ -0.06
Sox18P43680 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox18P43680 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Sox18P43680 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sox18P43680 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox18P43680 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.69□□□□□ -0.06
Sox18P43680 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox18P43680 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Sox18P43680 Gm15693-201ENSMUST00000120470 637 ntBASIC14.68□□□□□ -0.06
Sox18P43680 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.68□□□□□ -0.06
Sox18P43680 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sox18P43680 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.68□□□□□ -0.06
Sox18P43680 Gm27618-201ENSMUST00000183671 60 ntBASIC14.68□□□□□ -0.06
Sox18P43680 Gm19164-201ENSMUST00000210667 640 ntBASIC14.68□□□□□ -0.06
Sox18P43680 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sox18P43680 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox18P43680 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.68□□□□□ -0.06
Sox18P43680 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Sox18P43680 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox18P43680 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox18P43680 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox18P43680 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox18P43680 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Gm9385-201ENSMUST00000117563 472 ntBASIC14.67□□□□□ -0.06
Sox18P43680 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.67□□□□□ -0.06
Sox18P43680 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox18P43680 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox18P43680 Gm27989-201ENSMUST00000184721 107 ntBASIC14.67□□□□□ -0.06
Sox18P43680 Gm43433-201ENSMUST00000196573 481 ntBASIC14.67□□□□□ -0.06
Sox18P43680 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox18P43680 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.67□□□□□ -0.06
Sox18P43680 Gm18246-201ENSMUST00000221023 728 ntBASIC14.67□□□□□ -0.06
Sox18P43680 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sox18P43680 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.67□□□□□ -0.06
Sox18P43680 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Sox18P43680 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox18P43680 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Sox18P43680 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox18P43680 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox18P43680 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms