Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.77□□□□□ -0.37
Abca1P41233 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.77□□□□□ -0.37
Abca1P41233 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm8825-201ENSMUST00000182565 998 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm4518-201ENSMUST00000182638 718 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.77□□□□□ -0.37
Abca1P41233 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Abca1P41233 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Abca1P41233 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.76□□□□□ -0.37
Abca1P41233 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Abca1P41233 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Abca1P41233 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Abca1P41233 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Abca1P41233 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.76□□□□□ -0.37
Abca1P41233 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.76□□□□□ -0.37
Abca1P41233 Gm17968-201ENSMUST00000194902 784 ntBASIC12.76□□□□□ -0.37
Abca1P41233 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Abca1P41233 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.76□□□□□ -0.37
Abca1P41233 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Abca1P41233 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Abca1P41233 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Abca1P41233 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.76□□□□□ -0.37
Abca1P41233 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Abca1P41233 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.76□□□□□ -0.37
Abca1P41233 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.76□□□□□ -0.37
Abca1P41233 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.76□□□□□ -0.37
Abca1P41233 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Abca1P41233 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Abca1P41233 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Abca1P41233 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Gm17271-201ENSMUST00000165535 355 ntBASIC12.75□□□□□ -0.37
Abca1P41233 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Abca1P41233 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.75□□□□□ -0.37
Abca1P41233 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Abca1P41233 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms