Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cd9P40240 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cd9P40240 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cd9P40240 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.11■□□□□ 0.01
Cd9P40240 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.11■□□□□ 0.01
Cd9P40240 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Mir8098-201ENSMUST00000184011 137 ntBASIC15.11■□□□□ 0.01
Cd9P40240 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.11■□□□□ 0.01
Cd9P40240 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cd9P40240 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.11■□□□□ 0.01
Cd9P40240 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cd9P40240 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cd9P40240 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Cd9P40240 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.1■□□□□ 0.01
Cd9P40240 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.1■□□□□ 0.01
Cd9P40240 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.1■□□□□ 0.01
Cd9P40240 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.1■□□□□ 0.01
Cd9P40240 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Cd9P40240 Gm43767-201ENSMUST00000198933 381 ntBASIC15.1■□□□□ 0.01
Cd9P40240 Gm7787-201ENSMUST00000216858 688 ntBASIC15.1■□□□□ 0.01
Cd9P40240 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.1■□□□□ 0.01
Cd9P40240 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.1■□□□□ 0.01
Cd9P40240 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.1■□□□□ 0.01
Cd9P40240 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cd9P40240 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.1■□□□□ 0.01
Cd9P40240 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cd9P40240 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cd9P40240 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cd9P40240 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cd9P40240 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.09■□□□□ 0.01
Cd9P40240 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Cd9P40240 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cd9P40240 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.09■□□□□ 0.01
Cd9P40240 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cd9P40240 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cd9P40240 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms