Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Gm10499-201ENSMUST00000174094 934 ntBASIC12.66□□□□□ -0.38
Cdkn1aP39689 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.66□□□□□ -0.38
Cdkn1aP39689 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdkn1aP39689 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cdkn1aP39689 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.65□□□□□ -0.38
Cdkn1aP39689 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.65□□□□□ -0.38
Cdkn1aP39689 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.65□□□□□ -0.38
Cdkn1aP39689 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Gm25911-201ENSMUST00000157621 56 ntBASIC12.65□□□□□ -0.38
Cdkn1aP39689 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Gm2756-201ENSMUST00000195851 400 ntBASIC12.65□□□□□ -0.38
Cdkn1aP39689 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.65□□□□□ -0.38
Cdkn1aP39689 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdkn1aP39689 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdkn1aP39689 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.65□□□□□ -0.39
Cdkn1aP39689 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.64□□□□□ -0.39
Cdkn1aP39689 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 App-207ENSMUST00000227737 2827 ntBASIC12.64□□□□□ -0.39
Cdkn1aP39689 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.64□□□□□ -0.39
Cdkn1aP39689 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Gm43575-201ENSMUST00000196420 516 ntBASIC12.64□□□□□ -0.39
Cdkn1aP39689 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.64□□□□□ -0.39
Cdkn1aP39689 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cdkn1aP39689 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdkn1aP39689 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdkn1aP39689 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdkn1aP39689 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cdkn1aP39689 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdkn1aP39689 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms