Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Rom1P32958 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rom1P32958 Efs-202ENSMUST00000227037 2540 ntBASIC12.16□□□□□ -0.46
Rom1P32958 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.16□□□□□ -0.46
Rom1P32958 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.16□□□□□ -0.46
Rom1P32958 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.16□□□□□ -0.46
Rom1P32958 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Gm715-201ENSMUST00000117865 831 ntBASIC12.16□□□□□ -0.46
Rom1P32958 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rom1P32958 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Rom1P32958 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.16□□□□□ -0.46
Rom1P32958 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.16□□□□□ -0.46
Rom1P32958 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.16□□□□□ -0.46
Rom1P32958 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.16□□□□□ -0.46
Rom1P32958 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Gm10566-201ENSMUST00000086739 996 ntBASIC12.16□□□□□ -0.46
Rom1P32958 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Rom1P32958 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rom1P32958 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rom1P32958 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rom1P32958 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.15□□□□□ -0.46
Rom1P32958 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rom1P32958 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Rom1P32958 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.15□□□□□ -0.46
Rom1P32958 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.15□□□□□ -0.46
Rom1P32958 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.15□□□□□ -0.46
Rom1P32958 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.15□□□□□ -0.46
Rom1P32958 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rom1P32958 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rom1P32958 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.15□□□□□ -0.46
Rom1P32958 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rom1P32958 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rom1P32958 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rom1P32958 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rom1P32958 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rom1P32958 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.14□□□□□ -0.47
Rom1P32958 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.14□□□□□ -0.47
Rom1P32958 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rom1P32958 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.14□□□□□ -0.47
Rom1P32958 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rom1P32958 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rom1P32958 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms