Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tnfrsf1bP25119 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gm8318-201ENSMUST00000182954 872 ntBASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gm27628-201ENSMUST00000184911 107 ntBASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gm7787-201ENSMUST00000216858 688 ntBASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tnfrsf1bP25119 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfrsf1bP25119 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Tnfrsf1bP25119 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfrsf1bP25119 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfrsf1bP25119 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfrsf1bP25119 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.21□□□□□ -0.14
Tnfrsf1bP25119 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfrsf1bP25119 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1bP25119 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms