Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf1aP25118 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Gm27867-201ENSMUST00000184778 125 ntBASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf1aP25118 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf1aP25118 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Gm12497-201ENSMUST00000138778 237 ntBASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Gm19164-201ENSMUST00000210667 640 ntBASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms