Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nid1P10493 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nid1P10493 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.39□□□□□ -0.11
Nid1P10493 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nid1P10493 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.39□□□□□ -0.11
Nid1P10493 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Nid1P10493 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Gm11780-201ENSMUST00000136880 516 ntBASIC14.39□□□□□ -0.11
Nid1P10493 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.39□□□□□ -0.11
Nid1P10493 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.39□□□□□ -0.11
Nid1P10493 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.39□□□□□ -0.11
Nid1P10493 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.39□□□□□ -0.11
Nid1P10493 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nid1P10493 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nid1P10493 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.38□□□□□ -0.11
Nid1P10493 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.38□□□□□ -0.11
Nid1P10493 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.38□□□□□ -0.11
Nid1P10493 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.38□□□□□ -0.11
Nid1P10493 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.38□□□□□ -0.11
Nid1P10493 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nid1P10493 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Nid1P10493 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nid1P10493 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Nid1P10493 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.38□□□□□ -0.11
Nid1P10493 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Gm27646-201ENSMUST00000183989 110 ntBASIC14.38□□□□□ -0.11
Nid1P10493 Gm6296-201ENSMUST00000222599 943 ntBASIC14.38□□□□□ -0.11
Nid1P10493 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nid1P10493 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nid1P10493 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.38□□□□□ -0.11
Nid1P10493 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nid1P10493 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nid1P10493 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nid1P10493 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.37□□□□□ -0.11
Nid1P10493 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.37□□□□□ -0.11
Nid1P10493 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Ank2-226ENSMUST00000189368 339 ntBASIC14.37□□□□□ -0.11
Nid1P10493 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.37□□□□□ -0.11
Nid1P10493 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.37□□□□□ -0.11
Nid1P10493 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.37□□□□□ -0.11
Nid1P10493 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.37□□□□□ -0.11
Nid1P10493 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.37□□□□□ -0.11
Nid1P10493 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Nid1P10493 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.37□□□□□ -0.11
Nid1P10493 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nid1P10493 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Nid1P10493 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nid1P10493 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nid1P10493 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nid1P10493 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nid1P10493 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms